Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05-
11] 186 sequences; 4,397,606 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq35 95.1 6e-15
>seq35
Length=104599
Score = 95.1 bits (104), Expect = 6e-15
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945
||||| || || |||| |||||| | | || |||||| ||| ||||||||| ||
Sbjct 78217 ATATTGGGGCAAAATAGCGCCCAATCCCCGTCTTCTTCAACTCTCTTCATAAATAAGTCA 78158
Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005
|| | ||| | | | | || |||| ||| || ||||||||||| || || |||||||
Sbjct 78157 GGTACCCATAGTCCTAAGAACAAATTTCTTGCCCTCATTTCTTCCTTACCCGTATTCTTT 78098
Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA 26060
| | |||||| || ||||| || ||| ||||||||| || | ||| | | |||
Sbjct 78097 CTCAAATCTAAAAAGTCAAATATGTCTCTGTGCCATGGCTCAATATACACAACAA 78043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039426389950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |