Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq35 95.1 6e-15 >seq35 Length=104599 Score = 95.1 bits (104), Expect = 6e-15 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945 ||||| || || |||| |||||| | | || |||||| ||| ||||||||| || Sbjct 78217 ATATTGGGGCAAAATAGCGCCCAATCCCCGTCTTCTTCAACTCTCTTCATAAATAAGTCA 78158 Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005 || | ||| | | | | || |||| ||| || ||||||||||| || || ||||||| Sbjct 78157 GGTACCCATAGTCCTAAGAACAAATTTCTTGCCCTCATTTCTTCCTTACCCGTATTCTTT 78098 Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA 26060 | | |||||| || ||||| || ||| ||||||||| || | ||| | | ||| Sbjct 78097 CTCAAATCTAAAAAGTCAAATATGTCTCTGTGCCATGGCTCAATATACACAACAA 78043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039426389950