Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_021856.1 Length=155631 Score E Sequences producing significant alignments: (Bits) Value seq165 96.9 3e-15 >seq165 Length=118933 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 19418 AGTAGTGCATAACTTGCTATGTTAAAAGGAGCACCTAAGAAAATATCATTTGATCTCATG 19477 ||||| ||||||||||| || |||||||| | |||| | |||| ||||| | Sbjct 86041 AGTAGGGCATAACTTGCAATATTAAAAGGCACTCCTAGCCCTACATCACCAGATCTTTGG 85982 Query 19478 TATAACTTACAGCTCAAGGTACCATTGACTACGTAGAACTGGAACAGAACATGGCAGGGT 19537 |||||| | ||| | | | ||||| ||||| ||||||||| | |||||||| || Sbjct 85981 TATAACATGCAGTTTAGCTTTCCATTTACTACAACGAACTGGAATAAGACATGGCATGGA 85922 Query 19538 GGAAGAGCCATATACTCTAAGTCTCCTACGTTCCACGCAGATACGATGTGTCGGCGGCTG 19597 ||||||||||| | |||| || | | ||||| ||| |||| || ||||| ||| Sbjct 85921 GGAAGAGCCATCTGGTCTAGATCGCATGGATTCCATGCACATACAATCATACGGCGACTG 85862 Query 19598 TCTGGATTAGT 19608 | |||||| || Sbjct 85861 TTTGGATTTGT 85851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497890042402960