Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq103 167 2e-36 >seq103 Length=70461 Score = 167 bits (184), Expect = 2e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || |||||||| ||||| || ||||||||| | | Sbjct 50128 ATGCAGATATTCGTAAAGACACTCACTGGTAAAACCATTACACTTGAAGTAGAACCAAGT 50187 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | |||||| |||||| |||||||||||||||||||| ||||| ||| Sbjct 50188 GACACAATAGAGAATGTAAAAGCAAAGATACAAGACAAAGAAGGAATACCACCCGACCAA 50247 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || |||||||| || ||||||||||||||| |||| | || || || ||| Sbjct 50248 CAAAGATTAATCTTTGCAGGAAAACAGCTGGAGGATGGAAGAACACTTTCTGACTACAAC 50307 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935 || ||||| ||| ||| | || | || || || || | ||||| |||| Sbjct 50308 ATACAAAAAGAAAGTACAATTCATCTTGTCTTAAGACTGAGAGGAGGAGGAA 50359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896553988080