Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq165 93.3 4e-14 >seq165 Length=118933 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 16925 AGTAGTGCATAACTTGCTATGTTAAAAGGGGCACCTAAGAAAATATCATTTGATCTCATA 16984 ||||| ||||||||||| || |||||||| | |||| | |||| ||||| Sbjct 86041 AGTAGGGCATAACTTGCAATATTAAAAGGCACTCCTAGCCCTACATCACCAGATCTTTGG 85982 Query 16985 TATAACTTACAGCTCAAGGTACCGTTGACTACGTAGAACTGGAATAGGACATGACAAGGT 17044 |||||| | ||| | | | || || ||||| ||||||||||| |||||| || || Sbjct 85981 TATAACATGCAGTTTAGCTTTCCATTTACTACAACGAACTGGAATAAGACATGGCATGGA 85922 Query 17045 GGTAGAGCCATGTACTCTAAGTCTCCTACGTTCCACGCAGATACAATGTGTCGGCGGCTG 17104 || |||||||| | |||| || | | ||||| ||| ||||||| ||||| ||| Sbjct 85921 GGAAGAGCCATCTGGTCTAGATCGCATGGATTCCATGCACATACAATCATACGGCGACTG 85862 Query 17105 TCTGGGTTAGTTTT 17118 | ||| || ||||| Sbjct 85861 TTTGGATTTGTTTT 85848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501144434836480