Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq165 82.4 4e-11 >seq165 Length=118933 Score = 82.4 bits (90), Expect = 4e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 37841 GTTATTAATGAAATTAAAACTAACCCTACATCACGCCGTCTAATTGTCAATGGATGGAAT 37900 || ||| | ||| | ||||| || || | |||||| | ||||| || ||||||| Sbjct 85833 GTGATTGAGGAATTAAAAACAAATCCAAACAGTCGCCGTATGATTGTATGTGCATGGAAT 85892 Query 37901 CCACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTA 37960 ||| || |||| || || | || || || ||| || ||||||||| ||||| Sbjct 85893 CCATGCGATCTAGACCAGATGGCTCTTCCTCCATGCCATGTCTTATTCCAGTTCGTTGTA 85952 Query 37961 GAGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTT 38020 | |||||||| |||| ||| |||||| ||| | || |||| | |||| || Sbjct 85953 GTAAATGGAAAGCTAAACTGCATGTTATACCAAAGATCTGGTGATGTAGGGCTAGGAGTG 86012 Query 38021 CCATTTAATATTGCAAGCTATGC 38043 || |||||||||||||| ||||| Sbjct 86013 CCTTTTAATATTGCAAGTTATGC 86035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248809035979738