Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq103 82.4 7e-11 >seq103 Length=70461 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 |||||||| ||||||||||| | || | ||| || |||||||| || | | || Sbjct 50318 TCTTTTTGTATGTTGTAGTCAGAAAGTGTTCTTCCATCCTCCAGCTGTTTTCCTGCAAAG 50259 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 |||| | ||||| || || ||||| |||||||| || || ||| ||| | | Sbjct 50258 ATTAATCTTTGTTGGTCGGGTGGTATTCCTTCTTTGTCTTGTATCTTTGCTTTTACATTC 50199 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | || || | || || ||||| | || | ||||||||||| || || |||| | Sbjct 50198 TCTATTGTGTCACTTGGTTCTACTTCAAGTGTAATGGTTTTACCAGTGAGTGTCTTTACG 50139 Query 132113 AAAATCTGCATGACT 132127 || ||||||||| || Sbjct 50138 AATATCTGCATGGCT 50124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610091878960