Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq105 95.1 1e-14 >seq105 Length=68279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 |||||| | | || | ||||||||||| || || ||||| ||||||||||| || || Sbjct 55646 TTTGCAGACAGGCTAGTTGCTTTTGCATGTGTAGAGGGAATATTCTTCTCTGGATCATTT 55705 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | ||||||||||| || ||| | ||||| ||||| || || | |||||| |||||| Sbjct 55706 GCATCAATTTTCTGGCTTAAGAAGAGAGGCCTTATGCCAGGTCTTACTTTCTCTAACGAG 55765 Query 60093 CTGAT 60097 ||||| Sbjct 55766 CTGAT 55770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523524679840