Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq124 127 3e-24 >seq124 Length=58341 Score = 127 bits (140), Expect = 3e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 73886 TATTAAACTAGAAGAGGGGTGGATTGTTCATAGATATCTTCAAAATGGAGATATACTAGT 73945 ||| ||| ||||||| |||| |||||| | ||| | | |||||||| ||| || || | Sbjct 34096 TATAAAATTAGAAGAAGGGTACATTGTTGAGAGACACATGCAAAATGGGGATGTAGTACT 34037 Query 73946 GCTAAATAGACAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTAT 74005 | |||||||||||| | ||||||||| |||||||||| | | ||| | |||| Sbjct 34036 TTTTAATAGACAACCTTCATTACATAAAATGTCAATGATGGGACATTTCGTTCGAGTTAT 33977 Query 74006 GGATGTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGA 74065 ||| | ||||| |||| ||| ||| | || || ||| |||||||| ||||| || Sbjct 33976 GGAAGGTAAAACTTTTAGATTAAATTTAAGTTGTACGTCACCGTATAATGCGGATTTCGA 33917 Query 74066 TGGAGATGAAATGAATGCTCATGCGCCTCA 74095 |||||| ||||||||| |||| ||| || Sbjct 33916 TGGAGACGAAATGAATCTTCATATGCCACA 33887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679809845243520