Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq478 118 2e-21 >seq478 Length=25159 Score = 118 bits (130), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 68271 TCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAAT 68330 ||||| || || || ||||| |||||||| |||||||| | ||| || || || || Sbjct 21663 TCTTTCTGTATATTGTAATCACTAAGTGTCCTACCATCTTCAAGCTGTTTACCAGCAAAA 21722 Query 68331 ATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCC 68390 || | ||| ||||| || ||||| || ||||| ||||||||||| || || || || Sbjct 21723 ATCAATCTCTGTTGATCTGGTGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTT 21782 Query 68391 TCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || |||| ||| || ||||| || || || || |||||||| || || || || || Sbjct 21783 TCAATGGAGTCATTAGACTCTACGTCTAAAGTAATAGTTTTTCCTGTTAGCGTTTTTACA 21842 Query 68451 AATATCTGCATTATG 68465 ||||| |||||| || Sbjct 21843 AATATTTGCATTTTG 21857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616225129920