Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq478 125 6e-24 >seq478 Length=25159 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || | || ||| ||||||| ||||| ||| |||||| || || |||||||| || Sbjct 21627 CCTCCTCTTAATCTTAAAACTAGATGTAAAGTACTTTCTTTCTGTATATTGTAATCACTA 21686 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | | ||||||||| ||||||||||| | || | | |||||| || || || Sbjct 21687 AGTGTCCTACCATCTTCAAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCTGGTGGT 21746 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| ||| || ||||| | ||||| || ||| | || || ||| Sbjct 21747 ATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATGGAGTCATTAGACTCTACG 21806 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||| || || || ||||||||||| || ||||| Sbjct 21807 TCTAAAGTAATAGTTTTTCCTGTTAGCGTTTTTACAAATATTTGCAT 21853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131655472032