Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq504 163 2e-34 seq462 161 6e-34 seq124 158 8e-33 seq46 147 1e-29 seq1 113 3e-19 seq466 107 1e-17 seq478 104 2e-16 seq35 89.7 3e-12 seq433 87.8 1e-11 seq2 86.0 4e-11 >seq504 Length=119805 Score = 163 bits (180), Expect = 2e-34 Identities = 868/1364 (64%), Gaps = 68/1364 (5%) Strand=Plus/Plus Query 591515 CTTAAATAATACATTCCCGTTTTAAGTCCTTTGCGATATGCATAAAATAGACATGAAT-- 591572 |||||||||||||| || ||||| | ||| | | |||||||||| | ||| | | Sbjct 9224 CTTAAATAATACATGCCAGTTTTTAATCCGCTCTTAAATGCATAAAAATG-CAT-ACTGC 9281 Query 591573 TTAATTTGACAAAATCTGGTTTCT-CAATAAATATATTCATACTTTGTGTTTGATCTATA 591631 ||| ||| | || | ||| | | | | |||| ||| | || | |||||| ||| Sbjct 9282 TTAGTTT-AGAATAAGTGGGCTGTGCCACGAATAAATTTAATGACTGAGATTGATCGATA 9340 Query 591632 AATGGAGCT--CGATCAGCTGCCA----TATCA-ATGATAGATTGTTGTGGAATTTCCCA 591684 || |||| |||||||| || | ||||| ||| | ||| || | |||||| Sbjct 9341 AAA--AGCTGACGATCAGCAGCTAAATCTATCACATGCTTCATTTTT-----AGTTCCCA 9393 Query 591685 AACTGTTCTATAAATATTTTTAATATTTTGTGGTATATTNNNNNNNNNTGCTATGGATCC 591744 | ||| |||||| || |||||||| ||||||||| | ||| ||||| Sbjct 9394 TGCAGTTTTATAAAGATCTTTAATATCCTGTGGTATAGATTTAATATTTTGTATTGATCC 9453 Query 591745 TTGATAATATTTTATAAGATCCACCATATCTGAATTCCATAAACCGAGTTCCATTAAATC 591804 || ||| | | || || | ||| || | ||||||| | | |||||||| Sbjct 9454 TTCATATTCAATAATCAGGTTTTTCATTTCATGAGACCATAAATTTAAATTAATTAAATC 9513 Query 591805 TTTAATTAGATATTTGTTAATGACATAATAATCTCCTGCTAAAGTACTTCTTGAATAAAT 591864 ||| | | |||| || | | | | | |||||||| || ||||| | |||||| Sbjct 9514 TTTCAACAAGTATTGATTGACAATTTGAAACTCTCCTGCATGTGTTCTTCTAGTATAAAT 9573 Query 591865 ATTTTCGGTAAATGGTTCAATACATTCATTATATCCTTTAATTTGAGATGTACTTGCTGT 591924 |||| || ||||| |||| |||||||||| ||||||||| ||||| || || Sbjct 9574 ATTTGAAGTGAATGGCTCAAAGCATTCATTATTATTAAAAATTTGAGAAGTACTAGCAGT 9633 Query 591925 TGGCATACATG-TAGTAGTTAAACTGTTTCTAACACCATATATCATTATCTGTTCCCGAA 591983 |||||| | || ||| | ||| ||||| || |||| | |||||| ||| | || Sbjct 9634 AGGCATAGGAGATACTAGA-AGACTATTTCTCACCCCATGCTTTTTTATCTTTTCTCTAA 9692 Query 591984 GAGTTTTCCAATCCCACATTCCACTTAATTT--ATCTTCACCAAGATTCCATAAATCAAA 592041 | ||||| | ||| | ||||| | ||| || ||||| ||||| Sbjct 9693 GTAAATTCCATTT-----TTCTA---AATTTGGAACTTTTTTT---TTGCATAACTCAAA 9741 Query 592042 CTGGAATTTACCTTTTGAAAGTGGACTTCCCCAAAAGGTTTCATATGGACCAGATTCTTT 592101 || || | ||||| | ||| || || |||||||| |||||| ||||||| Sbjct 9742 GTGAAAAATTCCTTTACTTAACGGAGAGCCTGCGAATGTTTCATAAGGACCATATTCTTT 9801 Query 592102 GGCCATTTGTAATGATTCTGTCATTGTTCCAAAATATATAGTTTCAAATATTTTCCTATT 592161 || | || | ||| ||| | | | |||| || |||||||||||||| ||| Sbjct 9802 TGCAAGTTCAACTGACTCTTCAAGAGCGGAATAATAAATTGTTTCAAATATTTTAAAATT 9861 Query 592162 AAGATCTCGAGCAATATCAGAATCAAATGGAATTTTAAATATAGCAAACACATCGGCTAA 592221 | ||||| |||| | | | ||||| ||| | | || |||| |||| || || Sbjct 9862 TAAATCTCTAGCATTTTGACTGTCAAAAGGATATCGCATTAGTACAAAAGCATCTGCCAA 9921 Query 592222 TCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATTTGAAACACGTGT----TTTTT 592277 |||||||||||| | |||||||||| || | |||| || || | | | || || Sbjct 9922 TCCTTGTACACCTATTCCAATAGGTCGGTGTC-TAAAGTT---ACTCCTTTTACATTCTT 9977 Query 592278 CTACTGGATAATAATTTAC-ATCAATAATATTATTTAAATTTCTTGTAATAATTCTTGCG 592336 |||| |||||| ||| ||| |||||| |||||||| ||||||||| |||| | || | Sbjct 9978 CTACAGGATAA-AATGTACTGTCAATACAATTATTTAGATTTCTTGTTATAACTTTTACA 10036 Query 592337 ACCTTGTACAATTTATTATAATCAAACTCTGGAACACCGTTTTCATGAATAATAAATTTA 592396 | || ||| | | | ||||||| | | | || || | | ||| Sbjct 10037 ATTTTTGACAGCTCTTCAAAATCAAATTTT-------CCTTCTC-----TTACAAAACGT 10084 Query 592397 GGTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTGCAGATGAGAATTCTACA 592456 | | ||||| || || |||||||| ||| ||||| | | || |||| | Sbjct 10085 GAAAGACAAACACTTGCCAGGTTACAAACAGCAATTTCATTTTTATCGGAATATTCAATT 10144 Query 592457 ATTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAATCTGATTTGATTTTTGA 592516 ||||| || | |||||| || |||| ||| | ||| ||||| | | | Sbjct 10145 ATTTCTGCGCATAAATTTGATGATTTTATTATGCCCAAATTTTGTTGATTACTTAATCTA 10204 Query 592517 TTGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAATTTGTGTTTCCATTATT 592576 ||| | ||||||| | | ||||||||| ||||||||| ||||||| ||| |||||| Sbjct 10205 TTGCATGTATCTTTATAAAGCATGTATGGTGTACCTGTTTCTATTTGTGCTTCAATTATT 10264 Query 592577 TTAAACCATAAATCTCTTGCTTT--GATTTGTTTTATAAATCTACCCTCATTTTCATATT 592634 ||| || | ||| ||||| | ||| ||| | | || |||||||| Sbjct 10265 GCCTTCCACAATTTTCTAGCTTTAACAACCGTTCTAT---TTTTTGTTC--GTTCATATT 10319 Query 592635 TAAGATAAGCTTTATTAAATTCTTCACCATATTTTCCTACAATATCTGGA-CATTGTGAT 592693 | || ||||||||| || || || | | | | | || | | | || | Sbjct 10320 TTGTGTATAATTTATTAAAATCCTCGCCCCAAACATCATCGAGACCTTTAGCCTCGT-TT 10378 Query 592694 GGACACATAAGTGACCAATTTTCATCTTTTTCAACACGATCCATGAAAATATTATTAATC 592753 || || | | |||||| | ||||| ||| ||||| | ||||| || | || ||| ||| Sbjct 10379 GGGCAAAATAATGACCATTCTTCATTTTTGTCAACTCTTTCCATAAATAAATCATTTATC 10438 Query 592754 ATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTCAGCACCAGTATTTTTCTTTAGA 592813 ||| || || | |||||| ||||| |||| || |||||||| ||| | Sbjct 10439 CACAATGCAGTAAAAATATCTCTAGCTCTAATATCTTCACTTCCGGTATTTTTTCTTAAA 10498 Query 592814 TCAAGGAAGAAAAATATATCACCATGCCAAGGTTC--AATAAAT 592855 || | || ||| ||||| |||||||||||| ||||||| Sbjct 10499 TCTAAAAAATCAAAAATATCTTTATGCCAAGGTTCTAAATAAAT 10542 >seq462 Length=28027 Score = 161 bits (178), Expect = 6e-34 Identities = 191/253 (75%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 297420 TGCAGATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGT 297479 ||| |||||||| ||| ||||||||||||||||||||||||||||||| | || Sbjct 19446 TGCTGATTTTATTGGTGAAGGAATTGATCAAACAAGAGGTTGGTTTTATACTCTTCATGT 19387 Query 297480 TCTTTCTACAGCTAT-ATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTG 297538 ||||||| |||| |||| ||||||| || ||||||||||| ||||||| || |||| Sbjct 19386 CATTTCTACT-CTATTATTTGACAAACCGGCTTTTAAAAATGTTATTGTTAATGGCATTG 19328 Query 297539 TTAACGCAGCTGATGGACAAAAAATGTC--AAAAAG-TAAAGGTAATTATCCTGATCCAA 297595 || || | | || |||||||||| |||||| |||| |||||||| ||||||| Sbjct 19327 TTCTTGCTGAAAACGGTAAAAAAATGTCGAAAAAAGATAAA---AATTATCCAGATCCAA 19271 Query 297596 ATATTTTGATGGATAAATATGGTGCAGATACTTTACGTCTTTATTTATTATCAACACCTG 297655 ||||| | ||| | | || ||||| |||| |||| | | ||||| | || |||||| Sbjct 19270 ATATTGTCATGAAAACATTCGGTGCTGATAGTTTAAGGATGTATTTGATCTCTTCACCTG 19211 Query 297656 TAGTTAAAGCCGA 297668 |||| |||| || Sbjct 19210 TAGTAGAAGCAGA 19198 >seq124 Length=58341 Score = 158 bits (174), Expect = 8e-33 Identities = 245/347 (71%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || ||||||||| ||||| || ||| ||||||| ||||||| | |||| ||| Sbjct 1011 GTATTGAAACAGCAGGAGGTGTTGCAACTGTTCTTATTCCTAGAAATAGTTCTATTCCAG 952 Query 475968 GCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAA 476027 ||||| | || |||| | |||||| | |||||||||||| ||||||| || | Sbjct 951 TTAAAAAGACCGAAACATTTACAACTTATGCAGATAATCAAACAGCTGTAACAATTAATG 892 Query 476028 TCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087 | | ||||||| | ||| || |||| || ||||| ||||| | |||||| | | Sbjct 891 TTTATGAAGGTAACAGAGCTTTAGCTAAGGAAAATAATTTGATTGGATCATTTAATTTAG 832 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 | || ||| ||| ||||||||||| || || | |||||||| || |||||| ||||| Sbjct 831 ATGGAATTATTCCAGCTCCCAGAGGGGTACCAAAGATTGAAGTCACCTTTGATGTTGATA 772 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATA---AATCTAGTAACAAGAGTAAAAATA 476204 |||||| | | ||| |||||||| |||| || |||||| || ||| | Sbjct 771 ATAATGGTGTGTTGAATATTACTGCTGAGGATAAGCAAACTAGTA--AACAGT-CGTCTT 715 Query 476205 TAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAA 476251 |||| || | |||| || ||||||| ||||| |||||||||||| Sbjct 714 TAACAGTTTCTAACACTCAAAGTAGATTAACTGATGAACAAATTCAA 668 Score = 87.8 bits (96), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 318732 TTTAACTAATTTTCTTTGTACATAACCTGTGTCTGCAGTTTTAATAGCAGTATTAATAAT 318791 |||||| | | ||||||| | ||||||||| ||||||||||| ||||| || | ||| | Sbjct 32782 TTTAACAAGTCTTCTTTGAATATAACCTGTTTCTGCAGTTTTTATAGCTGTGTCAATTAA 32841 Query 318792 ACCTTCTCTTCCTGCCATAACTTGGAAAAAGAATTCAGCAGGTCCTAAACCTTTAA 318847 |||||||| || |||| | || ||| | ||||| | ||| |||| ||||||| Sbjct 32842 CCCTTCTCTACCACCCATTGCATGAAAATAAAATTCTTCTGGTGCTAATCCTTTAA 32897 >seq46 Length=72868 Score = 147 bits (162), Expect = 1e-29 Identities = 417/624 (67%), Gaps = 29/624 (5%) Strand=Plus/Plus Query 355129 ACTGTTCCTGTAAAATGACGATACCAAGGTTTCATTG--ATC-TTGGTTTTTGGTCATTA 355185 ||||| ||| ||||| | ||| |||| ||||| ||| |||||| | | ||| Sbjct 15716 ACTGTACCTACAAAATTTCTATAATAAGGCATCATTTCAATCATTGGTTCATCTT--TTA 15773 Query 355186 A--GTATTCTAATAATATTTTCATGAATGTCTCTTGGATTACATGGTGGAACATTTGTTG 355243 | || |||||||| ||||| || || ||| ||||||| | || | ||||| | Sbjct 15774 ATAGTTTTCTAATATTATTTACA---ATATCTAATGGATTAAAATTAGGGATGTTTGTAG 15830 Query 355244 AATATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACAT 355303 | | || || ||||||||||||| |||||||| || | ||| ||||| | ||| |||| Sbjct 15831 ACCAACCTGTTCCAATACCTTCTGCCCCATTAACCAATACCATAGGAATAATAGGAACAT 15890 Query 355304 AAAATACTGGTTCAATCATTTTATTATCTTCAAATTGATGTTGCAATACATCAAA--ATC 355361 | | ||||||| ||| || ||| |||||| | || || || | || ||| ||| Sbjct 15891 ACCACTCTGGTTCGATCGATTGATTCTCTTCATCTAAATATTTCA--AAATTAAATCATC 15948 Query 355362 ATGTTGTATGAAA-ATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG-TGCA 355419 || | ||||||| || || |||| | |||| || | || || ||||| || || Sbjct 15949 -TGATTTATGAAATATTAATCTAGTAATAGGATTAAGATAAGTAAAAATATAACGATGTG 16007 Query 355420 CTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAA 355479 | |||| ||| || || || ||||||||| |||||| || || | || | | |||| Sbjct 16008 C-TGCAGAATCCTTTCCGCCTTTTAATCTTGAACCAAACTGTCCTTCTGGTACAAGTAAA 16066 Query 355480 TTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGAC 355539 |||||||| || |||||| |||||||||| | | || ||| | | | || Sbjct 16067 TTTATGTTATTTGAACCAACAAAATTTTGTGCTAAACCGACAATGGTTGTATTTAAAGAA 16126 Query 355540 TGTTCTCCATGATGATA---TTTAGTTCTTTTCGAAACTGCACCTTGTAA-TTCAGATAC 355595 ||| || |||||||| | ||| | || ||||| ||| | || | ||||| Sbjct 16127 ACTTCGCCGTGATGATACTGTGTAGATGCATT---AACTG-ACCCAGCAAGGACTGATAC 16182 Query 355596 TTTAATTTCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGA 355655 ||||| |||| ||||||||| || || || | | || | ||| || || Sbjct 16183 TTTAA---CTTCCTTATAAATATTTTTTTTAAAACAAGTAAATAAAATTTTCCTCTGTCC 16239 Query 355656 TGGTTTAAGACCGTCAGCTATGTTAGGTATTGATCTCATATTATCATCGACTGAAAATGA 355715 ||| |||| ||||| | || ||||||||||| | ||||||| | | |||||| | Sbjct 16240 TGGCTTAAACCCGTCTAACACATTTGGTATTGATCTAAAATTATCAGCCATAGAAAATAA 16299 Query 355716 AATAAGTTCGCGATGAATAAAATC 355739 ||| | ||| | ||||||||| Sbjct 16300 AATTAATTCCTTGTTAATAAAATC 16323 Score = 93.3 bits (102), Expect = 3e-13 Identities = 239/358 (67%), Gaps = 16/358 (4%) Strand=Plus/Plus Query 356211 TTGGATAAATCCTTCATATTTAGCTAATGAAGGCCAAAAACGATGAATTAAATTCATTAT 356270 ||| | ||||||| | |||| || |||||| | || || || ||||| || | Sbjct 16657 TTGTAGAAATCCTGAAATTTTAAGTAGTGAAGGATACCAATAATCAAAAAAATTGATAAG 16716 Query 356271 TAATCCTTTAATATGATATCCATCAACGTCTTGATCTGCTAAAATCATAATACTACCATA 356330 | ||||||||| ||| ||||||| |||||||||| || ||||||| | ||||| Sbjct 16717 AAGTCCTTTAATGTGACTTCCATCATGATCTTGATCTGTTATTATCATAACATGTCCATA 16776 Query 356331 CCT-AAGTTCTTTAAGATCATTATATACTTTTCCTTGCTCTAAACCAACAAttttttttA 356389 ||| ||| | | | ||| | || ||| | || | || || | ||| ||||||| Sbjct 16777 CCTTAAGCTACT-AGTATCGGTGTACGTTTTCGCGTGTTGTAGCCCTAAAATCTTTTTTA 16835 Query 356390 TAGCAGTTATTTCTTCATTACTTGCGACAATTGCTGGACTTTTGGT------TCTTACAT 356443 ||||| | |||||| |||| || || | ||||| | || || |||||||| Sbjct 16836 TAGCAATAATTTCTACATT--TTCTGATATTTGCT----TATTAGTAGCTTCTCTTACAT 16889 Query 356444 TTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAAT-CTCTTCCGACAACATTTAAT 356502 ||| | || ||| |||| || | | ||| || | | || |||| |||| | | Sbjct 16890 TTAAAAGCTTACCTCTTAAAGGATACACACC-TAGTCTTTCTGTTCCTACAATAGACCTT 16948 Query 356503 CCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACATTTAT 356560 || ||||| | | | |||||| ||||||||||| || ||| || ||||||| || Sbjct 16949 CCTGACATTACCATCGTTTTAGCAGAATCTCCTTCTGTTAGATACAATGTACATTCAT 17006 >seq1 Length=193190 Score = 113 bits (124), Expect = 3e-19 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 269318 TAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATAGACATT 269377 |||| || || ||||| || | | | ||| ||| |||||| ||||| | || ||||| Sbjct 75359 TAAACGGAGTTGCATCTCCTTCTTCGCCTGTAAGAGCACAAGTCTTTCCCATTAAACATT 75418 Query 269378 CAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAATATCTG 269437 |||| | || || || ||||| | | || ||| || |||||||||||||||||||| Sbjct 75419 CAATAAGATGCCCTATAGTCATTCTGCTAGGTATAGCATGAGGATTAATAATAATATCTG 75478 Query 269438 GCAC---AAGTCCAGATTTAGTAAATGGCATATCTGCTCTATGAATTTTAAATCCAACTG 269494 |||| | | |||| |||||||||||||||| || || | | | | ||| |||| Sbjct 75479 GCACTATACCTTCAGA---AGTAAATGGCATATCTTCTTGATTTAATGTTATTCCTACTG 75535 Query 269495 TACCTTTTTGCG 269506 |||||||||||| Sbjct 75536 TACCTTTTTGCG 75547 >seq466 Length=27249 Score = 107 bits (118), Expect = 1e-17 Identities = 290/441 (66%), Gaps = 22/441 (5%) Strand=Plus/Minus Query 592130 CCAAAATATATAGTTTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAAT 592189 |||||||||| ||||||||||||| | ||||| | ||| || || ||| | Sbjct 26253 CCAAAATATAGTGTTTCAAATATTTCTTTGTTAAGTTTTCGTGCCCCTTCGCTTTCATAA 26194 Query 592190 GGAATTTTAAATATAGCAAACACATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTA 592249 || | | ||| || ||| |||||||||| |||||| ||||| | || ||||| ||| Sbjct 26193 GGTAATCTAAGCATTAAAAAAACATCGGCTAGTCCTTGAACACCCAGACCTATAGGCCTA 26134 Query 592250 TGGC----GTAAATTTGAAACACGTGTTTTTTCTACTGGATAATAATTTACA-TCAATAA 592304 || || | ||| | | || || || | |||||| || ||||| ||||||| Sbjct 26133 TGTTTTTTGTTACTTTT---CTC-TGCTTCTTTAAGAGGATAA-AAGTTACAATCAATAA 26079 Query 592305 TATTATTTAAATTTCTTGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACT 592364 |||| |||| | || | ||| || | || | ||| |||| | ||||| | Sbjct 26078 CTATATTAGCATTTTTAGTTACTATTTTTACAACTGATTTAAATAAATTAAAGTCAAATT 26019 Query 592365 CTGGAACACCGTTTTCATGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAA 592424 || ||| ||| | |||||| |||||||| || | ||| || || | Sbjct 26018 CTC------------CATTAATTACAAATTTCGGTAAACATATACTAGCCAAGTTGCATA 25971 Query 592425 CTGCATATTCATCTGCAGATGAGAATTCTACAATTTCACAACAAAGATTTGAGCCATTAA 592484 |||| |||||||| | | | ||| ||||||||| ||| || || || | ||| Sbjct 25970 CTGCTACTTCATCTGGACTGGTGTATTGTACAATTTCTGTACAGAGGTTAGAACATCTAA 25911 Query 592485 TTACGCCTATATTAATCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATGTATG 592544 || || ||||| | ||||| | | ||| |||| ||||||| |||| ||||| | Sbjct 25910 TTGTACCAATATTCTTTTGATTACTTAAATTATTTATAGTATCTTTATACAACATGTAGG 25851 Query 592545 GTACACCTGTTTCAATTTGTG 592565 || ||| ||||||||||||| Sbjct 25850 GTGTACCAGTTTCAATTTGTG 25830 >seq478 Length=25159 Score = 104 bits (114), Expect = 2e-16 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 || ||||| | ||||||||||| | ||| |||||| || || || ||||||| Sbjct 21645 ACTAGATGTAAAGTACTTTCTTTCTGTATATTGTAATCACTAAGTGTCCTACCATCTTCA 21704 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 || || || ||||||||||| | | |||||||| || || |||||||| ||||||||| Sbjct 21705 AGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCTGGTGGTATTCCTTCTTTGTCTTGA 21764 Query 480684 ATCTTTTGTTTGACAGCTTCAAT--AGT-ATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740 || || ||| ||| |||||| ||| || || | | | || | || ||||||||| Sbjct 21765 ATTTTAGCTTTTACATTTTCAATGGAGTCATTAGACTCT-ACGTCTAAA--GTAATAGTT 21821 Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || || ||||| Sbjct 21822 TTTCCTGTTAGCGTTTTTACAAATATTTG 21850 >seq35 Length=73508 Score = 89.7 bits (98), Expect = 3e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 480576 GTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCA 480635 ||||||||||| || ||||| ||| || ||||| |||||| | |||||| || Sbjct 17232 GTACTTTCTTTTTGAATGTTATAGTCATTAAGTGTTCTTCCATCTTCCAATTGCTTACCT 17173 Query 480636 GCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTG 480695 ||||| ||||| | |||||||| || || || ||||| || ||||| || || || Sbjct 17172 GCAAATATAAGTCTCTGTTGATCTGGTGGTATACCTTCTTTATCTTGTATTTTAGCCTTT 17113 Query 480696 ACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTC 480755 ||| ||| |||| ||| || | || | ||||| ||||| || ||||| ||| Sbjct 17112 ACATTTTCTATAGAATCCCCCGGTTCAACATCTAAAGTAATTGTTTTTCCTGTGAGTGTC 17053 Query 480756 TTAACGAAAATTTG 480769 || || || ||||| Sbjct 17052 TTTACAAATATTTG 17039 >seq433 Length=33022 Score = 87.8 bits (96), Expect = 1e-11 Identities = 165/239 (69%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 474640 TGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACA 474699 ||| | ||| ||| ||| || | ||||||| | || | |||| | ||||||||| | Sbjct 27191 TGACAATAAGAAATATTCTCCTGCACAAATTGGTGCATTTATTTTGTCAAAAATGAAAAA 27132 Query 474700 AACCGCGAGCTCATATCTTGGAC----AAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 |||| || || | || | ||| | ||| ||| | || || || || || | Sbjct 27131 TGCCGC-AGAGAATTTTTTAAATTCTAAAGTATTAA--GAT-CTGTTATAACAGTGCCCG 27076 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 |||||||| |||| ||| | ||||| ||||||||||||||||| ||| | || | Sbjct 27075 CATATTTTGATGACATGCAAAGGCAAGCTACTAAAGATGCGGGAAGGATTACGGGATTAC 27016 Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 | || | | | |||||||| || || || || |||||||||||||| ||||| ||| Sbjct 27015 AAGTGCTTAGAGTGATTAATGAGCCTACTGCGGCAGCACTTGCTTATGGGCTTGACAAG 26957 >seq2 Length=91783 Score = 86.0 bits (94), Expect = 4e-11 Identities = 271/413 (66%), Gaps = 13/413 (3%) Strand=Plus/Plus Query 594447 GCATTTTTTGCATCAGCAGATGGTATTGTAAATGCAAATATAAAAGAAAATTTAATTGAT 594506 ||||||||||| | ||||||||||||| || || ||| || || | || | || Sbjct 36799 GCATTTTTTGCCGCGTCAGATGGTATTGTTAACGCCAATTTAGTTGAGAGATTCGCTAAT 36858 Query 594507 GTTGTTAAAATTAAAGAAGCAGAATGTGCATATGGTAAACAATTTGAAATGGAAAATGCA 594566 | || | ||| ||||||| | || ||||| ||| | | || |||||| Sbjct 36859 GAAGTGACAATATTAGAAGCAAAGTGCTTTTATGGATTTCAAGTAGCCATAGAAAATATT 36918 Query 594567 CATGGAGAAATGTATTCATTGATGTTAGATACATTTGTAAAAGATGATATACTTAAGGAT 594626 ||| | || ||||||||||| | ||||| | | | | | |||| | | | || | Sbjct 36919 CATAGTGAGATGTATTCATTATTAATAGATGCTTATATTACAGATCA-AGATGAAAAAAC 36977 Query 594627 AAAT-TAATTAAAGCCATAAAAACTATGCCAAGTATTaaaaaaaaaGCAGATTGGTGTAA 594685 | || | |||| || |||| ||||| ||| |||| ||||| ||||| || ||| Sbjct 36978 ACATCTCTTTAATGCGATAAGTACTATTCCATGTATAAAAAAGAAAGCTGACTGGGCACT 37037 Query 594686 AAAATGGATTAAATCTGATAAAAC-TTATGC---ACATAAATTAGTTGCATTTGCTATTG 594741 |||||||||||| ||| ||| | | || | ||| | | |||| ||||| | Sbjct 37038 TAAATGGATTAAAGATGAAAAATCATCATTCGCGACACGCGTCA-TTGCTTTTGCGTGCG 37096 Query 594742 TTGAAGGTGTATTTTTTAGTGGATCATTCGCGTCGATATTCTGGTTAAAAACAAGACAAG 594801 | ||||| |||||||| || |||| ||||| || |||||| |||| | || || Sbjct 37097 TAGAAGGAATATTTTTTTCCGGCGCATTTGCGTCAATCTTCTGGCTAAAGAACAG---AG 37153 Query 594802 GTAATGTTATGCCTGGGTTAATTAAATCAAATAAATTTATTGCACGAGATGAA 594854 | | |||||||||| | | | || ||| |||| ||| | | |||||| Sbjct 37154 G---TCTTATGCCTGGTCTTACTTTCTCTAATGAATTAATTTCTAGGGATGAA 37203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268156208359328