Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq46 89.7 7e-13 >seq46 Length=72868 Score = 89.7 bits (98), Expect = 7e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 172973 TTTGCACAGGATTTTGTAGGTACAAATAACATAACATTACTTGAACCAGATGGTCAGTTT 173032 || ||||| ||||||| ||| |||||||||||| ||||||| |||||| || |||||| Sbjct 16101 TTAGCACAAAATTTTGTTGGTTCAAATAACATAAATTTACTTGTACCAGAAGGACAGTTT 16042 Query 173033 GGTACTAGACTTGAAGGAGGTAAAGATTCAGCCGCATCAAGGTATATTTATACT 173086 ||| | ||| | |||| || || ||||| || ||| | ||||||| |||| Sbjct 16041 GGTTCAAGATTAAAAGGCGGAAAGGATTCTGCAGCACATCGTTATATTTTTACT 15988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655275609624000