Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq478 96.9 8e-15 >seq478 Length=25159 Score = 96.9 bits (106), Expect = 8e-15 Identities = 157/223 (70%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || |||||| |||||||| ||||||||||| || ||||| || || || Sbjct 21856 AAAATG---CAAATATTTGTAAAAACGCTAACAGGAAAAACTATTACTTTAGACGTAGAG 21800 Query 206224 AGTTCTGACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | |||| | | ||| ||||| || ||| |||||||| ||||||||||| || Sbjct 21799 TCTAATGACTCCATTGAAAATGTAAAAGCTAAA-ATTCAAGACAAAGAAGGAATACCACC 21741 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || || ||| | || || || || || ||| | |||||||| ||||| | || Sbjct 21740 AGATCAACAGAGATTGATTTTTGCTGGTAAACAGCTTGAAGATGGTAGGACACTTAGTGA 21681 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| | |||||||| |||| | || || ||||| ||| Sbjct 21680 TTACAATATACAGAAAGAAAGTACTTTACATCTAGTTTTAAGA 21638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812683845656