Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq478 125 7e-24 >seq478 Length=25159 Score = 125 bits (138), Expect = 7e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||||||||| | || || || || |||| || ||| || || || ||||| || Sbjct 21624 TTTCCTCCTCTTAATCTTAAAACTAGATGTAAAGTACTTTCTTTCTGTATATTGTAATCA 21683 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || || | || || |||||||| || ||||||||||| | ||| ||||| || Sbjct 21684 CTAAGTGTCCTACCATCTTCAAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCTGGT 21743 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 ||||| |||||||| ||||||||||| ||| || || | | ||| || || Sbjct 21744 GGTATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATGGAGTCATTAGACTCT 21803 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| | |||||| ||||| || |||| ||||| || || |||||||||||| Sbjct 21804 ACGTCTAAAGTAATAGTTTTTCCTGTTAGCGTTTTTACAAATATTTGCATTTTG 21857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395013830720