Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq35 107 4e-18 >seq35 Length=73508 Score = 107 bits (118), Expect = 4e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983 |||||||| |||||||| || ||| || ||||||||||||| ||||| ||||| || Sbjct 17226 TCTTTTTGAATGTTATAGTCATTAAGTGTTCTTCCATCTTCCAATTGCTTACCTGCAAAT 17167 Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTT 211043 ||||| | ||||| || || || | ||||| || || || || || || || ||| Sbjct 17166 ATAAGTCTCTGTTGATCTGGTGGTATACCTTCTTTATCTTGTATTTTAGCCTTTACATTT 17107 Query 211044 TCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 || || | || |||||| || | ||| || || ||||| ||||| ||||||||| Sbjct 17106 TCTATAGAATCCCCCGGTTCAACATCTAAAGTAATTGTTTTTCCTGTGAGTGTCTTTACA 17047 Query 211104 AACACCTGCATT 211115 || | |||||| Sbjct 17046 AATATTTGCATT 17035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144039523640