Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq478 93.3 1e-13 >seq478 Length=25159 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAA-GTTCTCCCATCTTC 151954 || ||||| | |||| ||||| || || |||||||| |||| || || |||||||| Sbjct 21645 ACTAGATGTAAAGTACTTTCTTTCTGTATATTGTAATCA-CTAAGTGTCCTACCATCTTC 21703 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || ||| || || || || | ||||| || || | | |||||||| || ||||| Sbjct 21704 AAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCTGGTGGTATTCCTTCTTTGTCTTG 21763 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | ||| | |||||| || | |||||||||||| Sbjct 21764 AATTTTAGCTTTTACATTTTCAATGGAGTCATTAGACTCTACGTCTAAAGTAATAGTTTT 21823 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || | |||||||| Sbjct 21824 TCCTGTTAGCGTTTTTACAAATATTTGCATTTT 21856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153812876135656