Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq35 100 6e-16 >seq35 Length=73508 Score = 100 bits (110), Expect = 6e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || ||||||||||| ||||| |||||| ||| || | ||||| || Sbjct 17244 ACCAAATGCAAAGTACTTTCTTTTTGAATGTTATAGTCATTAAGTGTTCTTCCATCTTCC 17185 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||| || | | ||||| || || ||||| || || ||||| Sbjct 17184 AATTGCTTACCTGCAAATATAAGTCTCTGTTGATCTGGTGGTATACCTTCTTTATCTTGT 17125 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || || ||||| | || |||| ||| | ||| || || | ||| || || || Sbjct 17124 ATTTTAGCCTTTACATTTTCTATAGAATCCCCCGGTTCAACATCTAAAGTAATTGTTTTT 17065 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || | ||||| || ||||| |||||| Sbjct 17064 CCTGTGAGTGTCTTTACAAATATTTGCATT 17035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732011518544