Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq515 91.5 2e-13 >seq515 Length=119125 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 155894 TTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTC 155953 ||| || ||||| ||||||| | | ||| || | ||||||| |||||| || || Sbjct 14786 TTCGTCCGGTAAAGATATTTCTAAATGTATTTCAAATCTACCAGGTCGTAATAAAGCATC 14727 Query 155954 GTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTAC 156013 ||||||||||| |||| || ||||| || || | || || || | ||||||||| || Sbjct 14726 ATCAATTAAGTCTAGTCTATTAGTCATTCCAATTACTAGAACATTTTCTAAAGATTCAAC 14667 Query 156014 ACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 ||| || |||||| | ||||||||| || || Sbjct 14666 ACCATCCATTTTACTAAGTAATTGATTAACAAC 14634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667070730596160