Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq495 122 9e-23
>seq495
Length=2372
Score = 122 bits (134), Expect = 9e-23
Identities = 375/569 (66%), Gaps = 17/569 (3%)
Strand=Plus/Plus
Query 16215 AATGTAGTCCTTCGTCTC-TGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273
|||||| || || |||| || | || || || || ||||| || | || ||||| ||
Sbjct 582 AATGTAAGCCCTCATCTCGTGAT-ATGAGCTCATTTGAAAATGTCAGACCAGGCATCTTG 640
Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACA 16333
|||| ||||||||||||||| || | ||||| || || || || | ||| || |||
Sbjct 641 CCTCTTTTCTTTAACCAGAAGATGGATGCAAAGGAAGAGGAGAAAAAAAGACCTTCTACA 700
Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGT 16393
||||||| || || |||| | || || | ||||| |||||||||
Sbjct 701 CATGCAAATGCTATCAATCTGATAGAATA-GT--CCTCTTTTGAGTCAATCCATTTGAAA 757
Query 16394 -ACCCATTCGGCTTTTTGT---TTTATACAATCCATCGTTTCTATGGCCTTAAACAATTT 16449
||| ||| | |||||| | || || ||| || ||| || || |||||||
Sbjct 758 CACCAATTAGCCTTTTTCTCAATTGATGGAAT--AT--TTTTGATTGCGTTAAACAGAAA 813
Query 16450 CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTG 16509
| ||||| | |||| | ||||| || ||||| | ||| |||||| || || ||
Sbjct 814 GTGTTTTTGTTCGTTATCTTTAATATAAGTGTCAATTAACAAAGAGTACATCTCAGAATG 873
Query 16510 TATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
||||| ||||| ||||| ||||| || || ||| || || | || | |||
Sbjct 874 GATGTTTTCTATCATAATCTGGAATCCGTAAAAACATTTTGCTTCTTTAAGCTGAATTTC 933
Query 16570 CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629
|||||| ||| | || ||||| ||||| |||||||||||||| ||||| ||
Sbjct 934 TCTTGAAAATCTTTCTAATAAATTTTCATTTACGATTCCGTCACTTGCAGCGAAAAATGC 993
Query 16630 CA--ATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687
| | || || | |||||||||| || | | | | || |||| || |||
Sbjct 994 AAGAACATTTGAT--ATGAAATATTGCTCACTTTCTTTTAAAGAATTAAAATCATTCAAA 1051
Query 16688 TCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATT 16747
|| || | ||| |||||||| ||||| || | || || | |||||||||
Sbjct 1052 TCACGTGAAAGATCAACTTCTTCAACTGTCCAGAAAGAGGAAACCGCATGCTTATACATT 1111
Query 16748 TTCCAAATATCATTGTATTGTATGGGAAA 16776
| ||||||||||| || || ||| |||||
Sbjct 1112 TGCCAAATATCATGGTGTTCTATTGGAAA 1140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511404152533960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |