Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq41 98.7 9e-16
>seq41
Length=3466
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 28957 TAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAAC 29016
|||| |||||||| || | |||||||| || || ||||| || || ||| ||||
Sbjct 2968 TAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAAC 3027
Query 29017 CCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAG 29076
| | || | | | || | || ||||||| |||||||||||| | || |
Sbjct 3028 CATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTG 3087
Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATT 29136
||||||||||| | || ||||| || |||||| | |||||| | ||| | || ||||
Sbjct 3088 ATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATT 3147
Query 29137 ACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
| |||||||| || ||| |||| | || | || ||| ||||| |||| ||
Sbjct 3148 ATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGG 3199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428327631786965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |