Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq41 232 1e-55 >seq41 Length=3466 Score = 232 bits (256), Expect = 1e-55 Identities = 193/236 (82%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||| ||||||| ||||||||||| | || ||||| || | Sbjct 2973 ATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCATCT 3032 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct 3033 GATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAA 3092 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || |||||||| ||||||||||| ||| | ||||||||| |||||||||| Sbjct 3093 CAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATTATAAT 3152 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||||||| ||||| ||||| |||||| | ||| ||||||||| ||||| Sbjct 3153 ATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAAAAAAAA 3208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755440862550400