Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq495 185 8e-42 >seq495 Length=2372 Score = 185 bits (204), Expect = 8e-42 Identities = 574/876 (66%), Gaps = 17/876 (2%) Strand=Plus/Plus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||||||||||||| || | ||| ||||| ||||| |||||||||| | ||| ||||| Sbjct 277 TTTTTGATATTCAGATACACGTTTCTCAAAAAAGTTGGTTTTACCTTGTAATGAAATATT 336 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAG 14031 |||||| ||||||||||| || | | || | ||||| | |||| | | ||| || Sbjct 337 TTCCATGAAATCAAATGGGTTGTTCGTATTATAAACTTTTTTACAATCAAAATCTTGTAA 396 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 | | ||| || | ||| || | ||||| |||| ||| ||||||||||||||| || Sbjct 397 GATGCCATCTGCTACGAATTCTACATATTTGCACATGGAATTACAATTCATACCTATAAG 456 Query 14092 TTTTACAGG-AATTATATTGGTTAA-AAATTCTTTTTCTATAGACACAGCCTCGTTTATA 14149 | ||||| ||| | | |||| ||| || || ||||| || || || | | | Sbjct 457 TGAGACAGGCAATGAAA--CATTAACAAACTCCTTCTCTATTTCTACTGCTTCCATCACA 514 Query 14150 ATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 14209 || | | || || ||| || ||| |||| | |||||| ||| Sbjct 515 ATTTGTTTGACTATCTCTTTATTTACCTTATTTTTAAGATATGAGTGTATTAAAACGGCA 574 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 || | |||| | ||||||||||| || || || ||||||||||| | || ||| Sbjct 575 AATTTGTAATGTAAGCCCTCATCTCGTGATATGAGCTCATTTGAAAATGTCAGACCAGGC 634 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 ||| |||| ||| |||||||| || || | || || || ||| || || | || Sbjct 635 ATCTTGCCTCTTTTCTTTAACCAGAAGATGGATGCAAAGGAAGAGGAGAAAAAAAGACCT 694 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389 || || ||||| ||||| |||| | | || | | || ||||| | |||||| Sbjct 695 TCTACACATGCAAATGCTATCAATC-TGATAGAATAG-TCCTCTTTTGAGTCA-ATCCAT 751 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA---T 14446 || | ||| | || ||||| | ||| | || ||| || || ||||| Sbjct 752 TTGAAACACCAATTAGCCTTTTTCTCAATTGATGGAATATTTTTGATTGCGTTAAACAGA 811 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 || |||| | || ||| ||| ||| || || ||||| | || ||||| ||| Sbjct 812 AAGTGTTTTTGTTCGTTA--TCTT-TAATATAAGTGTCAATTAACAAAGAGTACATCTCA 868 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 || || |||||||| || ||||| || || ||||||||| | |||||| || Sbjct 869 GAATGGATGTTTTCTATCATAATCTGGAATCCGTAAAAACATTTTGCTTCTTTAAGCTGA 928 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 | ||| |||||||||| ||||||||||| || || || ||||| || || ||| Sbjct 929 ATTTCTCTTGAAAATCTTTCTAATAAATTTTCATTTACGATTCCGTCACTTGCAGCGAAA 988 Query 14627 AATGCCAATATGTTTTTAATAAAGTATTGCT--CTTCATTGCTGAGTTTTTTCCAATCGG 14684 ||||| | | ||| || || ||||||| ||| || | | || |||| Sbjct 989 AATGCAAGAACATTTGATATGAAATATTGCTCACTTTCTT--TTAAAGAATTAAAATCAT 1046 Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744 ||||| |||||||| ||||| ||||||||||| ||| | ||| || | |||| Sbjct 1047 TCAAATCACGTGAAAGATCAACTTCTTCAACTGTCCAGAAAGAGGAAACCGCATGCTTAT 1106 Query 14745 ACATTACCCATATTTCTTTATATAATATAGGaaaaa 14780 ||||| ||| || || | | | ||| ||||||| Sbjct 1107 ACATTTGCCAAATATCATGGTGTTCTATTGGAAAAA 1142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482335935000040