Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq41 158 9e-34
>seq41
Length=3466
Score = 158 bits (174), Expect = 9e-34
Identities = 186/249 (75%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| ||||||||||||||||| | || |||||||| || || ||||| |
Sbjct 3199 CCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCT 3140
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | |||||||||||||| || || |||| || | |||||| || ||||
Sbjct 3139 AATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGA 3080
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| |||||||| || |||||| ||| |||||| |||| || | ||| ||| ||
Sbjct 3079 ATACCTTCTTTATCTTGAATTTTTGCT-TTTACATTTTCAATTGAATCAGATGGTTCAAC 3021
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375
|| || || || ||||||||||| | ||||| |||||||||||||| ||| | |||||
Sbjct 3020 TTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATCTTTAATAATAA 2961
Query 15376 AATTTTAAT 15384
||| | |||
Sbjct 2960 AATCTAAAT 2952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362172124263423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |