Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq41 150 1e-31
>seq41
Length=3466
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||| |||||||| || ||||||| || || ||||||||||||||||||||
Sbjct 3200 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGC 3141
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|||| | |||| || |||||||| ||||||||||| || | ||| || || | ||
Sbjct 3140 TAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGG 3081
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||||||||||| ||||||| ||| || | ||| | ||| | || || ||
Sbjct 3080 AATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAAC 3021
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || |||||||| ||||| || || ||||| ||||||||
Sbjct 3020 TTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCAT 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354770668865244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |