Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq41 113 4e-20
>seq41
Length=3466
Score = 113 bits (124), Expect = 4e-20
Identities = 168/236 (71%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| |||||| | ||||| ||||||||||| || ||| | || || | ||| | ||| ||
Sbjct 2970 AAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCA 3029
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|| | || || | || ||| ||| ||| || |||||||| || || || |||
Sbjct 3030 TCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTGAT 3089
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTA 26944
||||||||| | || | | || |||||| | ||||||| || ||| | ||| || ||
Sbjct 3090 CAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAG-AACATTAGCAGATTA 3148
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAA 27000
||| |||||||||||| |||| | ||| | || | ||| | ||||| || ||||
Sbjct 3149 TAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAAAA 3204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478652808802160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |