Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq41 120 3e-22 >seq41 Length=3466 Score = 120 bits (132), Expect = 3e-22 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | ||||| ||||||||||| || ||| | || || | ||||| || || Sbjct 2970 AAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGA-ACC 3028 Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | | || | || || | || ||| ||| ||| || |||||||| || || || || Sbjct 3029 ATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTGA 3088 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATT 24165 |||||| ||| | || | | || || ||| | ||||||| || ||| | ||| |||| Sbjct 3089 TCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAG-AACATTAGCAGATT 3147 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||| |||||||||||| ||| | |||||||| |||||||| ||||| || Sbjct 3148 ATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGG 3199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927600528465