Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq41 138 1e-27 >seq41 Length=3466 Score = 138 bits (152), Expect = 1e-27 Identities = 184/252 (73%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 |||||| |||||||||||||| ||||| | || || ||||| || || | ||| || Sbjct 2966 ATTAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGA 3025 Query 115339 GTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| | || | ||| | | |||||| ||||||| ||||||||||| | || Sbjct 3026 A-CCATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCAC 3084 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||| |||||| | || | ||| || |||||||||||||||| | ||| | || | Sbjct 3085 CTGATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAG 3144 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAAC 115517 ||||||| ||||||||||| |||| ||||| | || || ||||| |||| || ||| Sbjct 3145 ATTATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAAA- 3203 Query 115518 CACAATAAAAAA 115529 | || |||||| Sbjct 3204 AAAAAGAAAAAA 3215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425335690240360