Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq41 134 9e-27
>seq41
Length=3466
Score = 134 bits (148), Expect = 9e-27
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
||||||||||| || | || || ||||| | ||| || || ||||||||||| |||||
Sbjct 3202 TTACCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCT 3143
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
| || | | | || ||||||||||| || |||||||||| | ||||||||| |
Sbjct 3142 GCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGT 3083
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|| | |||||||| || ||||||| || ||||| | | | ||| ||||
Sbjct 3082 GGAATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCA 3023
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
||||| ||||| ||||||||||| || || ||||| || || || ||||| |||
Sbjct 3022 ACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATCTTT 2969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334940656283093
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |