Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq41 134 9e-27 >seq41 Length=3466 Score = 134 bits (148), Expect = 9e-27 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 ||||||||||| || | || || ||||| | ||| || || ||||||||||| ||||| Sbjct 3202 TTACCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCT 3143 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 | || | | | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 3142 GCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGT 3083 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | |||||||| || ||||||| || ||||| | | | ||| |||| Sbjct 3082 GGAATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCA 3023 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 ||||| ||||| ||||||||||| || || ||||| || || || ||||| ||| Sbjct 3022 ACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATCTTT 2969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940656283093