Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq41 138 1e-27 >seq41 Length=3466 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || || || |||||| | || ||| | ||||| || | ||| Sbjct 2973 ATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCATCT 3032 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || | || || | || ||||||||| ||| || |||||||| ||||||||||| Sbjct 3033 GATTCAATTGAA--AATGTAAAAGCAAAAATTCAA-GATAAAGAAGGTATTCCACCTGAT 3089 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || |||||||||||||||| | || | | ||||| Sbjct 3090 CAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATTAT 3149 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||||||||||||| || |||||||||| |||| ||||||| || || Sbjct 3150 AATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAA 3202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433319534260445