Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq41 159 3e-34
>seq41
Length=3466
Score = 159 bits (176), Expect = 3e-34
Identities = 169/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
||||||||||||||||||||||||| ||||| |||||||| | || | ||||| |||
Sbjct 2968 TAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAAC 3027
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
| | ||| | | || || | ||| |||||||||||| || || ||||||||||| |
Sbjct 3028 CATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTG 3087
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
|||||||| | | |||||||| || ||||| ||||| ||| | || | | ||||
Sbjct 3088 ATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATT 3147
Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
| || |||||||||||| || ||||||||||||| ||||
Sbjct 3148 ATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATT 3190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419719799957695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |