Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq41 116 9e-21
>seq41
Length=3466
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
|| ||||||||||| |||||||| || || | || | ||| |||||||||||||| |||
Sbjct 3169 GTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCT 3110
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|| || || | | |||||| | ||| || ||||||||||| || ||||| |||||
Sbjct 3109 GCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTT 3050
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| ||||| || ||||| | ||| ||||| | || || || || || || | ||
Sbjct 3049 ACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTT 2990
Query 288457 TTGACGAATATCTGCAT 288473
|| || || || |||||
Sbjct 2989 TTAACAAAAATTTGCAT 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179630171741834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |