Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq41 116 9e-21 >seq41 Length=3466 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || ||||||||||| |||||||| || || | || | ||| |||||||||||||| ||| Sbjct 3169 GTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCT 3110 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || || | | |||||| | ||| || ||||||||||| || ||||| ||||| Sbjct 3109 GCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTT 3050 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||||| || ||||| | ||| ||||| | || || || || || || | || Sbjct 3049 ACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTT 2990 Query 288457 TTGACGAATATCTGCAT 288473 || || || || ||||| Sbjct 2989 TTAACAAAAATTTGCAT 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630171741834