Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq41 102 8e-17 >seq41 Length=3466 Score = 102 bits (112), Expect = 8e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| ||| | || |||||||||||| || |||||||| | || | Sbjct 3190 AATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTT 3131 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | || || || ||| | || | | || || || || ||||| |||||| Sbjct 3130 CCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCT 3071 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| |||||| |||||| || | || |||| | || ||||| | ||| Sbjct 3070 TTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTT 3011 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAATAAT 64452 | || || || || || ||||| || ||||||||||| ||||||||| Sbjct 3010 ATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATCTTTAATAAT 2963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634788367320