Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq41 118 1e-21 >seq41 Length=3466 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGA 45184 || || |||| ||| | || ||| ||||| ||||||||||| ||| | | | || | Sbjct 3187 CTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCA 3128 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 || || |||||||| ||||| |||| |||| ||| || || || ||||| |||||||| Sbjct 3127 -TCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTT 3069 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||||| ||| | ||| | | || || | || ||||| | || | Sbjct 3068 ATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTAT 3009 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || |||| ||||| ||||||||||||||| Sbjct 3008 AGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATC 2972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451994142985880