Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq41 102 6e-17
>seq41
Length=3466
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570
|| ||||| ||||| ||||||||||| ||||||||||| || || | | |||| ||
Sbjct 3181 ACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCT 3122
Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630
|||||||| || |||| ||||| | || ||||| | || | |||||||| ||
Sbjct 3121 AATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGA 3062
Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690
|||||| ||| | | | | || || | ||| || ||||| || || ||||||
Sbjct 3061 ATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTA 3002
Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| ||||| ||||| || || || |||||
Sbjct 3001 CCTGTTAATGTTTTAACAAAAATTTGCAT 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347362813592099
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |