Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq41 131 4e-25 >seq41 Length=3466 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || | ||| |||||||||||||| ||||| || | || Sbjct 3194 TCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGT 3135 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || |||||||| || || | || |||||| || || ||||| || Sbjct 3134 TCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACC 3075 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||||||| || || || ||||| | || || ||| ||||| | Sbjct 3074 TTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAA 3015 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| || ||||| || || | |||||| Sbjct 3014 TGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCAT 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109458812981501