Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq495 237 2e-57 >seq495 Length=2372 Score = 237 bits (262), Expect = 2e-57 Identities = 603/909 (66%), Gaps = 9/909 (1%) Strand=Plus/Plus Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 |||||||||||| || ||| | || ||||| || || || |||| || ||| ||||| Sbjct 277 TTTTTGATATTCAGATACACGTTTCTCAAAAAAGTTGGTTTTACCTTGTAATGAAATATT 336 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCT-TCA 37002 |||||| ||||||||||| || |||||||| | | |||| || || | | | Sbjct 337 TTCCATGAAATCAAATGGGTTGTTCGTATTATAAACTTTTTTACAATCAAAATCTTGTAA 396 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 || ||| ||| || || ||||||| ||||| ||||| | | | || ||||| || | Sbjct 397 GATGCC-ATCTGCTACGAATTCTACATATTTGCACATGGAATTACAATTCATACCTATAA 455 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTA 37122 || || || | || | | | || ||| || |||||| ||| || || | || | Sbjct 456 GTGAGACAGGCAATGAAACATTAACAAACTCCTTCTCTATTTCTACTGCTTCCATCACAA 515 Query 37123 TAT-TAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCA 37181 | | | | || || ||| | || || ||| | |||| | |||| ||| Sbjct 516 TTTGTTTGACTATCT-CTTTATTTACCTTATTTTTAAGATATGAGTGTATTAAAACGGCA 574 Query 37182 AAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGC 37241 || | ||||||| || ||||||| ||| | ||||| ||||| || | || ||| Sbjct 575 AATTTGTAATGTAAGCCCTCATCTCGTGATATGAGCTCATTTGAAAATGTCAGACCAGGC 634 Query 37242 ATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCT 37301 || |||||||| || | ||| || || | |||||| || || || |||| |||| Sbjct 635 ATCTTGCCTCTTTTCTTTAACCAGAAGATGGATGCAAAGGAAGAGGAGAAAAAAAGACCT 694 Query 37302 TCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGA-AATCCA 37360 || || ||||||||||| | | || ||| | | || | | || |||||| Sbjct 695 TCTACACATGCAAATGCTATCAATCTGATA--GAA--TAGTCCTCTTTTGAGTCAATCCA 750 Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAG 37420 ||| ||||| |||||| | || || ||| ||| ||||| || || || Sbjct 751 TTTGAAACACCAATTAGCCTTTTTCTCAATTGATGGAATATTTTTGATTGCGTTAAACAG 810 Query 37421 AAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGA 37480 ||||| ||||| ||| ||||| | |||||||| ||||||| ||| ||||| ||||| Sbjct 811 AAAGTGTTTTTGTTCGTTATCTTTAATATAAGTGTCAATTAACAAAGAGTACATCTCAGA 870 Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAAC 37540 || || ||||| || ||||| || || |||||||| | ||||| | |||| Sbjct 871 ATGGATGTTTTCTATCATAATCTGGAATCCGTAAAAACATTTTGCTTCTTTAAGCTGAAT 930 Query 37541 ATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAA 37600 || | |||| || | ||| |||||||| || || || ||||| || || || || Sbjct 931 TTCTCTTGAAAATCTTTCTAATAAATTTTCATTTACGATTCCGTCACTTGCAGCGAAAAA 990 Query 37601 AGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAAT 37660 |||||||||| | ||| |||| | ||| | | ||| || ||||||| | Sbjct 991 TGCAAGAACATTTGATATGAAATATTGCTCACTTTCTTTTAAAGAATTAAAATCATTCAA 1050 Query 37661 ATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACAT 37720 ||| ||| | ||||||||| ||||| ||||| ||| | | ||| | |||||||| Sbjct 1051 ATCACGTGAAAGATCAACTTCTTCAACTGTCCAGAAAGAGGAAACCGCATGCTTATACAT 1110 Query 37721 CGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATCAGATGATTCTTTAAG 37780 ||||||||||| |||| ||||||||| | || ||| || |||| | || Sbjct 1111 TTGCCAAATATCATGGTGTTCTATTGGAAAAAGAGTGAACTTATTGTCTGGTTCTGTTAG 1170 Query 37781 AATATATTC 37789 ||||||||| Sbjct 1171 AATATATTC 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592304931452120