Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq41 100 2e-16
>seq41
Length=3466
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614
|| || ||||||| || || |||||||||||||| ||||| | || ||| | ||
Sbjct 3184 AAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCT 3125
Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674
|| || || ||||| |||||||| | || |||||||| | |||| || || || ||
Sbjct 3124 TCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCT 3065
Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734
||| ||| ||||||| | | || || || | || || |||| || || |||
Sbjct 3064 TGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTT 3005
Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|| || || || ||||| |||||||| ||||||
Sbjct 3004 TTACCTGTTAATGTTTTAACAAAAATTTGCATC 2972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380930157788769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |