Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq41 205 2e-47 >seq41 Length=3466 Score = 205 bits (226), Expect = 2e-47 Identities = 196/250 (78%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185 ||| | |||||||||| |||| | || | ||| || ||| ||||| |||||||| Sbjct 3207 TTTTTTTACCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTAT 3148 Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245 | || | ||| ||||| ||| ||||||||||| || ||||| |||||||| ||||||| Sbjct 3147 AATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGAT 3088 Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305 |||| || || |||||||||||||| ||||| | ||||| |||| ||| | ||| || | Sbjct 3087 CAGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATG 3028 Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT-TTTA 193364 |||||||| | ||||||||||||||||||| ||||| ||||| |||||||| |||| Sbjct 3027 GTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATCTTTA 2968 Query 193365 TTAGTAAAAT 193374 || |||||| Sbjct 2967 ATAATAAAAT 2958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899636373174960