Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq707 95.1 4e-14 >seq707 Length=2074 Score = 95.1 bits (104), Expect = 4e-14 Identities = 178/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 59990 CCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAATAA 60049 || || || || || | || |||||| ||||| ||||| || |||||||| |||||||| Sbjct 790 CCTGTTCCTATTCCATCTGCTCCATTTATAAGTATCATTGGTATAATTGGTATATAATAT 731 Query 60050 ACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTTCG 60109 | ||| || || | | ||| |||| || || |||| | || || || ||||| Sbjct 730 AATGGTTCTCCAATTATATTATCTTCTTCTATATAATTTAATAAATTATCATCTATTTCT 671 Query 60110 GGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTGCG 60169 ||| ||| | || || || ||||| ||| ||||||| || |||||||| Sbjct 670 TTAAAAATAAATCTTGTTATTTTTTCTAATTTTGTTGAAATATATCTTGGTGATGCTGCA 611 Query 60170 TCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGTTG 60229 || || || || | ||| | ||||||||||| | || | || ||||| || || Sbjct 610 TCTTTTCCTCCTTTTCTACGAGAACCAAATTGTCCATCAGGATATAAAAGATTTATATTA 551 Query 60230 TTAGAGCCTACGAAATTTTGAG 60251 || || |||| ||||| |||| Sbjct 550 TTTGATCCTATAAAATTATGAG 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471787371166211