Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq707 105 8e-18
>seq707
Length=2074
Score = 105 bits (116), Expect = 8e-18
Identities = 257/392 (66%), Gaps = 12/392 (3%)
Strand=Plus/Plus
Query 165953 AAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAACAA 166012
|| |||| ||||||||||| | || |||| || || ||||| | ||||| ||
Sbjct 441 AAAGTTGTACAATTAAGTGGTAAAATTTTAGAAAAAGCAAATTATCATCATGGAGATGTT 500
Query 166013 AATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCA 166072
|||| |||| || || || || | || ||||| | || |||||||||||
Sbjct 501 TCTTTACAACAAACAATTATAAAATTAACTCATAATTTTATAGGATCAAATAATATAAAT 560
Query 166073 TTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTGCA 166132
| | | |||||||| ||||||||| | | | ||||||| |||||| | || ||
Sbjct 561 CTTTTATATCCTGATGGACAATTTGGTTCTCGTAGAAAAGGAGGAAAAGATGCAGCATCA 620
Query 166133 TCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAGAAGAAGAT 166192
|||||||||||| || ||| | | |||||| || || ||| |||| |||| ||||
Sbjct 621 CCAAGATATATTTCAACAAAATTAGAAAAAATAACAAGATTTATTTTTAAAGAAATAGAT 680
Query 166193 GACCCTATTTTAAATTATACTGTTGA------------GGGTGAACCTATTCATTTTATT 166240
|| | | |||||||||| | || || ||||| | ||| |||
Sbjct 681 GATAATTTATTAAATTATATAGAAGAAGATAATATAATTGGAGAACCATTATATTATATA 740
Query 166241 CCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGATGGTCATGT 166300
||| | || ||| | || | || ||||| | ||| || ||||||||||||| |
Sbjct 741 CCAATTATACCAATGATACTTATAAATGGAGCAGATGGAATAGGAACAGGATGGTTAACA 800
Query 166301 TTTATACCTCAATATAATCCTTTAGAATTAAT 166332
||||| | |||||| |||||| ||||
Sbjct 801 AAAATACCAAATTATAATATTTTAGATATAAT 832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632476926489640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |