Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq707 105 8e-18 >seq707 Length=2074 Score = 105 bits (116), Expect = 8e-18 Identities = 257/392 (66%), Gaps = 12/392 (3%) Strand=Plus/Plus Query 165953 AAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAACAA 166012 || |||| ||||||||||| | || |||| || || ||||| | ||||| || Sbjct 441 AAAGTTGTACAATTAAGTGGTAAAATTTTAGAAAAAGCAAATTATCATCATGGAGATGTT 500 Query 166013 AATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCA 166072 |||| |||| || || || || | || ||||| | || ||||||||||| Sbjct 501 TCTTTACAACAAACAATTATAAAATTAACTCATAATTTTATAGGATCAAATAATATAAAT 560 Query 166073 TTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTGCA 166132 | | | |||||||| ||||||||| | | | ||||||| |||||| | || || Sbjct 561 CTTTTATATCCTGATGGACAATTTGGTTCTCGTAGAAAAGGAGGAAAAGATGCAGCATCA 620 Query 166133 TCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAGAAGAAGAT 166192 |||||||||||| || ||| | | |||||| || || ||| |||| |||| |||| Sbjct 621 CCAAGATATATTTCAACAAAATTAGAAAAAATAACAAGATTTATTTTTAAAGAAATAGAT 680 Query 166193 GACCCTATTTTAAATTATACTGTTGA------------GGGTGAACCTATTCATTTTATT 166240 || | | |||||||||| | || || ||||| | ||| ||| Sbjct 681 GATAATTTATTAAATTATATAGAAGAAGATAATATAATTGGAGAACCATTATATTATATA 740 Query 166241 CCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGATGGTCATGT 166300 ||| | || ||| | || | || ||||| | ||| || ||||||||||||| | Sbjct 741 CCAATTATACCAATGATACTTATAAATGGAGCAGATGGAATAGGAACAGGATGGTTAACA 800 Query 166301 TTTATACCTCAATATAATCCTTTAGAATTAAT 166332 ||||| | |||||| |||||| |||| Sbjct 801 AAAATACCAAATTATAATATTTTAGATATAAT 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632476926489640