Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq41 125 6e-24
>seq41
Length=3466
Score = 125 bits (138), Expect = 6e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| ||||||| |||| ||||||||||| || | ||||| ||| | |
Sbjct 2972 GATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCATC 3031
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | |||| |||||| ||| || ||||| |||||||| || || || |||||
Sbjct 3032 TGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCA 3091
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | || || ||||| || ||||| | || ||| |||| | ||||||||||
Sbjct 3092 ACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATTATAA 3151
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|||||||| ||| || |||| || || || ||||
Sbjct 3152 TATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATT 3190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449888585176840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |