Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq41 87.8 1e-12
>seq41
Length=3466
Score = 87.8 bits (96), Expect = 1e-12
Identities = 167/245 (68%), Gaps = 1/245 (0%)
Strand=Plus/Plus
Query 107551 TTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609
||||| |||||||||||||| ||||| |||||||| ||||| || || | ||| ||
Sbjct 2967 TTAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAA 3026
Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669
| ||| | | | | |||||| ||| ||| ||||||||||| | ||
Sbjct 3027 CCATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCT 3086
Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729
||||| || ||| | || | ||| |||||||| | || || | | |||| | || ||
Sbjct 3087 GATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGAT 3146
Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAAT 107789
|| || |||||||| || ||| || || | || || ||||| |||| || || ||
Sbjct 3147 TATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAAAAAA 3206
Query 107790 AAAAA 107794
|| ||
Sbjct 3207 AAGAA 3211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398869007318467
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |