Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq41 154 1e-32 >seq41 Length=3466 Score = 154 bits (170), Expect = 1e-32 Identities = 156/199 (78%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 29595 TTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATA 29654 |||||||||||| |||||||| || | || | ||| || | |||||| || ||| | Sbjct 3164 TTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAA 3105 Query 29655 TATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAG 29713 ||| |||||||| ||||| || |||||||| ||||| ||||| |||||||| ||| ||| Sbjct 3104 TATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTG-AATTTTTGCTTTTACAT 3046 Query 29714 TTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 |||| | | ||||| |||| ||||| | ||||||||||| || ||||| ||||||| Sbjct 3045 TTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAA 2986 Query 29774 CAAATATCTGCAT-TTTAA 29791 |||| || ||||| ||||| Sbjct 2985 CAAAAATTTGCATCTTTAA 2967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211674141023