Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq707 89.7 7e-13 seq926 82.4 1e-10 >seq707 Length=2074 Score = 89.7 bits (98), Expect = 7e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 163071 AAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCATTACTTGAAC 163130 |||| || || || || | || ||||| | || ||||||||||| | | | | Sbjct 511 AAACAATTATAAAATTAACTCATAATTTTATAGGATCAAATAATATAAATCTTTTATATC 570 Query 163131 CTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGCATCAAGATATA 163190 ||||||| ||||||||| | | | ||||||| |||||| | || || ||||||||| Sbjct 571 CTGATGGACAATTTGGTTCTCGTAGAAAAGGAGGAAAAGATGCAGCATCACCAAGATATA 630 Query 163191 TTTATACCAAACCAAATAAAATATTAAAATATATATTTAGAGAAGAAGATGACCCTATTT 163250 ||| || ||| | | |||||| || || ||| |||| |||| |||||| | | | Sbjct 631 TTTCAACAAAATTAGAAAAAATAACAAGATTTATTTTTAAAGAAATAGATGATAATTTAT 690 Query 163251 TAAATTATA 163259 ||||||||| Sbjct 691 TAAATTATA 699 >seq926 Length=46699 Score = 82.4 bits (90), Expect = 1e-10 Identities = 114/158 (72%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAG--GAATGGCCCAAAAAGGAACTTGTG 193497 ||||| |||||| | || ||||||||| ||| || | ||||| || || || Sbjct 16921 CGTATTCCTGAATTGGGTGATAAATTTGC--CAGTCGACACGGACAAAAGGGTACAATTG 16978 Query 193498 GTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTA 193557 |||| | || |||||||||||||||||| |||| ||| || ||||| ||||| | Sbjct 16979 GTATTACTTTAAGACAAGAAGATATGCCATTCACAGAAGAAGGCATTGTACCTGATATAA 17038 Query 193558 TTATTAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 | || |||||| | ||||| ||||| | ||||| ||| Sbjct 17039 TCATAAATCCACACTGTATACCATCTCGTATGACAATT 17076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635164872628840