Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq707 107 2e-18 >seq707 Length=2074 Score = 107 bits (118), Expect = 2e-18 Identities = 179/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 165163 AAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAACAA 165222 ||||||| ||||||||||| | || |||| || || ||||| | ||||| || Sbjct 441 AAAGTTGTACAATTAAGTGGTAAAATTTTAGAAAAAGCAAATTATCATCATGGAGATGTT 500 Query 165223 AATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCA 165282 |||| |||| || || || || | || ||||| | || ||||||||||| Sbjct 501 TCTTTACAACAAACAATTATAAAATTAACTCATAATTTTATAGGATCAAATAATATAAAT 560 Query 165283 TTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGCA 165342 | | | |||||||| ||||||||| | | | ||||||| |||||| | || || Sbjct 561 CTTTTATATCCTGATGGACAATTTGGTTCTCGTAGAAAAGGAGGAAAAGATGCAGCATCA 620 Query 165343 TCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAGAAGAAGAT 165402 |||||||||||| || ||| | | |||||| || || ||| |||| |||| |||| Sbjct 621 CCAAGATATATTTCAACAAAATTAGAAAAAATAACAAGATTTATTTTTAAAGAAATAGAT 680 Query 165403 GACCCTATTTTAAATTATA 165421 || | | |||||||||| Sbjct 681 GATAATTTATTAAATTATA 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628518605806080