Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq41 86.0 1e-11 >seq41 Length=3466 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 11/132 (8%) Strand=Plus/Minus Query 81646 AGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA--------- 81696 |||| ||| || || ||||||||||| | || ||||| | |||||||| Sbjct 3170 AGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACC 3111 Query 81697 --CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTT 81754 |||| |||| |||||||||| | || | || |||| ||||||||||| |||||||| Sbjct 3110 TGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTT 3051 Query 81755 TATATTTTCAAT 81766 || ||||||||| Sbjct 3050 TACATTTTCAAT 3039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903393097898080