Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq41 100 7e-16 >seq41 Length=3466 Score = 100 bits (110), Expect = 7e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || || |||||||| ||| ||||| || | ||| Sbjct 2988 AAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCATCTGATTCAATTGAAAAT 3047 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| |||||| |||||||| |||||||| ||| || || |||||| | || || Sbjct 3048 GTAAAAGCAAAA-ATTCAAGATAAAGAAGGTATTCCACCTGATCAACAAAGATTAATATT 3106 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || || ||||||||||| || || || ||||| || | || ||||| Sbjct 3107 TGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATTATAATATTCAAAAAGAAAG 3166 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 |||| | || | ||||| ||| Sbjct 3167 TACTTTACATTTAGTTTTAAGA 3188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181796527247363