Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq41 136 3e-27 >seq41 Length=3466 Score = 136 bits (150), Expect = 3e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313 ||||| ||||||||||||||||||||||| || || || || || || ||||| ||| Sbjct 2967 TTAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAA 3026 Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373 || ||||| ||| | || ||| ||||||| || |||||||| | || | Sbjct 3027 CCATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCT 3086 Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433 ||||||||||| | || | ||| || ||||||||||||||| | ||| | | ||| Sbjct 3087 GATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGAT 3146 Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || ||||||||| ||| |||||||||| || || ||| |||| || Sbjct 3147 TATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGG 3199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402321739862624