Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq707 116 2e-21 >seq707 Length=2074 Score = 116 bits (128), Expect = 2e-21 Identities = 375/572 (66%), Gaps = 15/572 (3%) Strand=Plus/Minus Query 64890 ATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAA 64949 ||||||| || || || | || |||||||| | ||||| || ||||||||| |||| Sbjct 792 ATCCTGTTCCTATTCCATCTGCTCCATTTATAAGTATCATTGGTATAATTGGTATATAAT 733 Query 64950 AGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTT 65009 | | || || |||| | | ||| || || | ||| || || | |||||| || Sbjct 732 ATAATGGTTCTCCAATTATATTATCTTCTTCTATATAATTTAATAAATTATCATCTATTT 673 Query 65010 TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGT 65069 | ||| ||| | | |||||||| | |||| || ||||||||||| ||||| Sbjct 672 CTTTAAAAATAAATCTTGTTATTTTTTCTAATTTTGTTGAAATATATCTTGGTGATGCTG 613 Query 65070 GGTCTT---GTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATAT 65126 |||| ||| ||| || | ||||| || |||| || ||| | ||| |||| Sbjct 612 CATCTTTTCCTCCTTTTCTACGAGAACCAAATTGTCCATCAGGATATAAAAGATTTATAT 553 Query 65127 TGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCAC 65186 | ||||| || |||||||| |||| | | ||||||| | | |||| | || | Sbjct 552 TATTTGATCCTATAAAATTATGAGTTAATTTTATAATTGTTTGTTGTAAAGAAACATCTC 493 Query 65187 CGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCG 65246 | |||||||| || | ||| | | | ||||| ||||| ||||||| || Sbjct 492 CATGATGATAATTTGCTTTTTCTAAAATTTTACCACTTAATTGTACAACTTT--TTGTGA 435 Query 65247 TTG--TTAAATTCT-TTTTAAATGCAGAATACAA--TATTTTCCGTAAACTAATTTTCAA 65301 ||| ||||||| | ||||||| || |||| || || ||| | | | ||| || Sbjct 434 TTGAATTAAATTATATTTTAAA--CA-AATAAAAATTACTTTTCTTTGTCCTGGTTTAAA 378 Query 65302 TCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTC 65361 ||||| |||||| |||||| ||||| | ||| | || ||| | || ||||| Sbjct 377 ACCATCTATTAAAGAAGGAATACTTCTAATATTATCTGCCATAGAAAAAAGAATTAATTC 318 Query 65362 TTTGTTAATAAATTCT-TCATATGAAACACTCGTATTATCTGTATTCAAATAACTATCGC 65420 ||| |||||||| ||| | || | | | | || || || ||| || ||| Sbjct 317 TTTATTAATAAAATCTGTTAT-TTTTATATTTCTAATAGAATGATCTAAAAAAGTATTAG 259 Query 65421 GATTATATTTTTCTAACCATTCTTTTCTATCA 65452 ||||| | |||| ||||||| |||||||||| Sbjct 258 GATTACAATTTTTTAACCATAATTTTCTATCA 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235675395622950