Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq707 116 2e-21
>seq707
Length=2074
Score = 116 bits (128), Expect = 2e-21
Identities = 375/572 (66%), Gaps = 15/572 (3%)
Strand=Plus/Minus
Query 64890 ATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAA 64949
||||||| || || || | || |||||||| | ||||| || ||||||||| ||||
Sbjct 792 ATCCTGTTCCTATTCCATCTGCTCCATTTATAAGTATCATTGGTATAATTGGTATATAAT 733
Query 64950 AGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTT 65009
| | || || |||| | | ||| || || | ||| || || | |||||| ||
Sbjct 732 ATAATGGTTCTCCAATTATATTATCTTCTTCTATATAATTTAATAAATTATCATCTATTT 673
Query 65010 TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGT 65069
| ||| ||| | | |||||||| | |||| || ||||||||||| |||||
Sbjct 672 CTTTAAAAATAAATCTTGTTATTTTTTCTAATTTTGTTGAAATATATCTTGGTGATGCTG 613
Query 65070 GGTCTT---GTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATAT 65126
|||| ||| ||| || | ||||| || |||| || ||| | ||| ||||
Sbjct 612 CATCTTTTCCTCCTTTTCTACGAGAACCAAATTGTCCATCAGGATATAAAAGATTTATAT 553
Query 65127 TGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCAC 65186
| ||||| || |||||||| |||| | | ||||||| | | |||| | || |
Sbjct 552 TATTTGATCCTATAAAATTATGAGTTAATTTTATAATTGTTTGTTGTAAAGAAACATCTC 493
Query 65187 CGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCG 65246
| |||||||| || | ||| | | | ||||| ||||| ||||||| ||
Sbjct 492 CATGATGATAATTTGCTTTTTCTAAAATTTTACCACTTAATTGTACAACTTT--TTGTGA 435
Query 65247 TTG--TTAAATTCT-TTTTAAATGCAGAATACAA--TATTTTCCGTAAACTAATTTTCAA 65301
||| ||||||| | ||||||| || |||| || || ||| | | | ||| ||
Sbjct 434 TTGAATTAAATTATATTTTAAA--CA-AATAAAAATTACTTTTCTTTGTCCTGGTTTAAA 378
Query 65302 TCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTC 65361
||||| |||||| |||||| ||||| | ||| | || ||| | || |||||
Sbjct 377 ACCATCTATTAAAGAAGGAATACTTCTAATATTATCTGCCATAGAAAAAAGAATTAATTC 318
Query 65362 TTTGTTAATAAATTCT-TCATATGAAACACTCGTATTATCTGTATTCAAATAACTATCGC 65420
||| |||||||| ||| | || | | | | || || || ||| || |||
Sbjct 317 TTTATTAATAAAATCTGTTAT-TTTTATATTTCTAATAGAATGATCTAAAAAAGTATTAG 259
Query 65421 GATTATATTTTTCTAACCATTCTTTTCTATCA 65452
||||| | |||| ||||||| ||||||||||
Sbjct 258 GATTACAATTTTTTAACCATAATTTTCTATCA 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235675395622950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |