Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq41 122 5e-23 >seq41 Length=3466 Score = 122 bits (134), Expect = 5e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||| | ||| || || |||||||| |||||||||| | ||||| | ||| Sbjct 3184 AAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCT 3125 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||| ||||||||||| | ||||| || || || | || || || ||| Sbjct 3124 TCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCT 3065 Query 34615 GTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| ||||| ||||| | ||||| || || ||||||| ||||| || Sbjct 3064 -TGAATTTTTGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGT 3006 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 |||||| ||||| ||||| |||||||| ||||| || Sbjct 3005 TTTACCTGTTAATGTTTTAACAAAAATTTGCATCTT 2970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723451265499